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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
LGG rs10508780 chr10:33439232 G/A 0 406 15.03 18.43 5.93 KM Plot
LGG rs10509537 chr10:89915191 G/T 4.68E-5 407 5.52 17.8 14.9 KM Plot
LGG rs10510083 chr10:122684525 A/G 9.29E-5 407 16.08 14.8 16.3 KM Plot
LGG rs10515738 chr5:156019919 G/A 2.72E-5 406 16.67 14.4 11.17 KM Plot
LGG rs10515740 chr5:155962175 A/C 5.1E-6 407 15.27 15.23 15.37 KM Plot
LGG rs10516697 chr4:84618260 C/T 5.55E-16 407 15.47 12.87 5.17 KM Plot
LGG rs10548537 chr11:61234275 ACTCT/A 0.000175 406 16.68 18.83 14.67 KM Plot
LGG rs10706421 chr7:7569637 GA/G 1.11E-16 406 2.23 15.33 15.35 KM Plot
LGG rs10706529 chr16:67482196 AG/A 0.000119 406 15.33 15.13 19.2 KM Plot
LGG rs10708042 chr12:102243931 TA/T 2.26E-7 398 14.4 20.23 20.9 KM Plot
LGG rs10742769 chr11:45843023 T/C 6.45E-9 406 3.77 14.95 15.57 KM Plot
LGG rs10745295 chr10:135194890 A/G 4.14E-5 407 21.3 13.02 15.35 KM Plot
LGG rs10753892 chr1:201111410 T/C 7.99E-6 406 9.28 15.37 15.3 KM Plot
LGG rs10761616 chr10:64009076 G/A 0.000174 402 12.17 15.47 15.83 KM Plot
LGG rs10784771 chr12:69621264 A/G 6.52E-5 397 15.15 15 18.27 KM Plot